Init version

individual/Phenotype.cpp

@@ -0,0 +1,38 @@
+#include "Phenotype.h"
+#include <iostream>
+#include <sstream>
+
+Phenotype::Phenotype(Trait _trait){
+	this->traitsMap[_trait.getName()] = _trait;
+}
+
+void Phenotype::addTrait(Trait _trait){
+	std::map<std::string,Trait>::iterator it;
+	it = this->traitsMap.find(_trait.getName());
+
+	if(it == this->traitsMap.end()){
+		this->traitsMap[_trait.getName()] = _trait;
+	}
+	else{
+		std::cerr<<"Phenotype.cpp(16): already has the trait: "<<it->first<<std::endl;
+	}
+}
+
+std::ostream& operator << (std::ostream& os, const Phenotype& p){
+	std::map<std::string,Trait>::const_iterator it;
+	for(it = p.traitsMap.begin(); it != p.traitsMap.end(); it++){
+		os<<(it->first)<<"\t"<<(it->second.getTraitValueCont())<<"\t";
+	}
+
+	return os;
+}
+
+std::string Phenotype::toSimpleString() const {
+	std::stringstream os;
+	std::map<std::string,Trait>::const_iterator it;
+	for(it = this->traitsMap.begin(); it != this->traitsMap.end(); it++){
+		os<<(it->second.getTraitValueCont())<<"\t";
+	}
+
+	return os.str();
+}