#include "Phenotype.h"
#include <iostream>
#include <sstream>

Phenotype::Phenotype(Trait _trait){
	this->traitsMap[_trait.getName()] = _trait;
}

void Phenotype::addTrait(Trait _trait){
	std::map<std::string,Trait>::iterator it;
	it = this->traitsMap.find(_trait.getName());

	if(it == this->traitsMap.end()){
		this->traitsMap[_trait.getName()] = _trait;
	}
	else{
		std::cerr<<"Phenotype.cpp(16): already has the trait: "<<it->first<<std::endl;
	}
}

std::ostream& operator << (std::ostream& os, const Phenotype& p){
	std::map<std::string,Trait>::const_iterator it;
	for(it = p.traitsMap.begin(); it != p.traitsMap.end(); it++){
		os<<(it->first)<<"\t"<<(it->second.getTraitValueCont())<<"\t";
	}

	return os;
}

std::string Phenotype::toSimpleString() const {
	std::stringstream os;
	std::map<std::string,Trait>::const_iterator it;
	for(it = this->traitsMap.begin(); it != this->traitsMap.end(); it++){
		os<<(it->second.getTraitValueCont())<<"\t";
	}

	return os.str();
}